Bioinformatic Analysis in Epigenetics Research (Nick Pervolarakis)

Published: Nov. 3, 2022, 7:01 a.m.

b'In this episode of the Epigenetics Podcast, we caught up with Nick Pervolarakis from Active Motif to talk about bioinformatic analysis in epigenetics research.\\nWhile many \\u201cbench scientists\\u201d are familiar with the workflows of ChIP-Seq, ATAC-Seq and CUT&Tag, and even the preparation and analysis of the libraries, the steps between sequencing and fully analyzed data is sometimes thought of as a mystery known only to bioinformatic experts. Most of us have some understanding that the raw data is usually in a file format called a FASTQ. But how do we get from FASTQ files to peaks on a genome browser? This Podcast Episode will provide a peek behind the curtain of the informatic analysis we perform at Active Motif, as part of our end-to-end epigenetic services.\\n\\xa0\\nReferences\\n\\nLife in the FASTQ Lane\\n\\n\\nBioinformatics Resource Center\\n\\n\\nEpigenetic Services\\n\\xa0\\n\\nRelated Episodes\\n\\nMultiple challenges of ATAC-Seq, Points to Consider (Yuan Xue)\\n\\n\\nMultiple challenges of CUT&Tag (Cassidee McDonough, Kyle Tanguay)\\n\\n\\nMultiple Challenges in ChIP (Adam Blattler)\\n\\n\\xa0\\nContact\\n\\nActive Motif on Twitter\\n\\n\\nEpigenetics Podcast on Twitter\\n\\n\\nActive Motif on LinkedIn\\n\\n\\nActive Motif on Facebook\\n\\n\\nEmail: podcast@activemotif.com\\n\\nc8dqseb1h2Zyf2blC15qkyPgu9sB5stin27nqhzP'