RNA binding of Hfq monomers promotes RelA-mediated hexamerization in a limiting Hfq environment

Published: Aug. 11, 2020, 4:04 p.m.

Link to bioRxiv paper: http://biorxiv.org/cgi/content/short/2020.08.11.244277v1?rss=1 Authors: Basu, P., Elgrably-Weiss, M., Hassouna, F., Kumar, M., Wiener, R., Altuvia, S. Abstract: The RNA chaperone Hfq acting as a hexamer, is a known mediator of post-transcriptional regulation expediting basepairing between small RNAs (sRNAs) and their target mRNAs. However, the intricate details associated with Hfq-RNA biogenesis are still unclear. Previously, we reported that the stringent response regulator, RelA is a functional partner of Hfq that facilitates Hfq-mediated sRNA-mRNA regulation in vivo and induces Hfq hexamerization in vitro. Here, for the first time we show that RelA-mediated Hfq hexamerization requires an initial binding of RNA, preferably sRNA to Hfq monomers. By interacting with a Shine-Dalgarno-like sequence (GGAG) in the sRNA, RelA stabilizes the initially unstable complex of RNA bound-Hfq monomer, enabling the attachment of more Hfq subunits to form a functional hexamer. Overall, our study showing that RNA binding to Hfq monomers is at the heart of RelA-mediated Hfq hexamerization, challenges the previous concept that only Hfq hexamers can bind RNA. Copy rights belong to original authors. Visit the link for more info